Looks up each sample's GEOME BCID, walks up its parent records (e.g.
Tissue, Sample, Event) and adds expedition and project details, then stores
everything in the project database for viewing in the app and use at export.
Usage
fetch_geome(path = ".", ids = NULL, bcids = NULL)
Arguments
- path
Path to the project directory (default = current working directory)
- ids
Sample IDs to fetch. Default: every sample with a BCID.
- bcids
Optional BCIDs to set for `ids` first (same length as `ids`).
A blank value removes that sample's BCID and its GEOME data.
Value
Invisibly, a data frame of `ID`, `status`, and `message`.
