R/annotate_utils.R
compare_aa.Rd
Pairwise comparison of AA sequences
compare_aa(query, target, type = c("pctId", "similarity"), subMx = "BLOSUM80")
The focal sequence
The target sequence
The type of comparison to perform. Options are 'pctId' and 'similarity'
The substitution matrix to use for the comparison. Default is BLOSUM80